BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A11SP1|AL427106
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1878 0.0
>3x_Contig1801
Length = 57606
Score = 1878 bits (946), Expect = 0.0
Identities = 957/961 (99%), Gaps = 1/961 (0%)
Strand = Plus / Plus
Query: 1 acctgaagaccagttatctcatggtgtatgatgtctaactttgccagttccagtttcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12067 acctgaagaccagttatctcatggtgtatgatgtctaactttgccagttccagtttcaat 12126
Query: 61 attgaaaaatttctatgaaaattcacggcagggtaacgttaaaactaataattcattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12127 attgaaaaatttctatgaaaattcacggcagggtaacgttaaaactaataattcattcat 12186
Query: 121 tcatactcaaaagatacaaaattatatacatatatgcttagatgataggcaatatgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12187 tcatactcaaaagatacaaaattatatacatatatgcttagatgataggcaatatgccct 12246
Query: 181 gctgtcagtagcgtaaagtgttctatggctatggaagtggattcggatgcgtctgggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12247 gctgtcagtagcgtaaagtgttctatggctatggaagtggattcggatgcgtctgggaat 12306
Query: 241 tgttcgttccaccatcgggctcattttgtgattcaccctgtgggaagacgacatagtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12307 tgttcgttccaccatcgggctcattttgtgattcaccctgtgggaagacgacatagtaga 12366
Query: 301 acgttatcggtaccggctcgaactggttctcgtactggttatgatattggtaagttggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12367 acgttatcggtaccggctcgaactggttctcgtactggttatgatattggtaagttggta 12426
Query: 361 ggacgttcctatctggttcctttgcttgctgggacggaggtgcaagtcttctggtctgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12427 ggacgttcctatctggttcctttgcttgctgggacggaggtgcaagtcttctggtctgtc 12486
Query: 421 tcttggttcttattcctgttctagatctgtatgattttgtcattacggggcgtgcgtgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12487 tcttggttcttattcctgttctagatctgtatgattttgtcattacggggcgtgcgtgac 12546
Query: 481 tcttctgtattgcttaaggattttgtactctcgtgatattgtctaagcctgcgaatggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12547 tcttctgtattgcttaaggattttgtactctcgtgatattgtctaagcctgcgaatggac 12606
Query: 541 gcattaatgagcaagggacgaccttggtcgtcctnnatatacagatactccttccacgga 600
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12607 gcattaatgagcaagggacgaccttggtcgtcct-tatatacagatactccttccacgga 12665
Query: 601 tgtgagtcaagaccgattttctttcgtattccaagaactcggtatcaaaggttacggtcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12666 tgtgagtcaagaccgattttctttcgtattccaagaactcggtatcaaaggttacggtcg 12725
Query: 661 atgcccctcgatgattacttcagccgcacagaaatccaggcagcaatgtccggaaaatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12726 atgcccctcgatgattacttcagccgcacagaaatccaggcagcaatgtccggaaaatct 12785
Query: 721 attttcgttccggaatctttcatccacgtgatatacacgtggatgtcacgtgagagtggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12786 attttcgttccggaatctttcatccacgtgatatacacgtggatgtcacgtgagagtggt 12845
Query: 781 ttttctttcccactctctgtgtctctcttttttgagtcagcttaccatgactccataaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12846 ttttctttcccactctctgtgtctctcttttttgagtcagcttaccatgactccataaga 12905
Query: 841 aaagaaagattcgtctcgaacgtggaatgatgcagttgaaagcgaatttctgttgagawa 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12906 aaagaaagattcgtctcgaacgtggaatgatgcagttgaaagcgaatttctgttgagaaa 12965
Query: 901 tcgttgacttggtatccttgcttcctctgagagttctgggattcaatctctctattaawt 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12966 tcgttgacttggtatccttgcttcctctgagagttctgggattcaatctctctattaatt 13025
Query: 961 c 961
|
Sbjct: 13026 c 13026
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6335
Number of Sequences: 1807
Number of extensions: 6335
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)